DNA Binding Motif

						

			
Accessions: PROP1_methyl_4 (HT-SELEX2 May2017)

			
Names: PROP1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: TAATTrsrTTA
Weblogo: 
PSSM: P0      A      C      G      T
01    446      0      0  22475      T
02  22475      0      0      0      A
03  22475      0      0      0      A
04      0   1926      0  22475      T
05    694   4843   4190  22475      T
06   7347   3955   8106   3067      r
07   3805   7602  10191    877      s
08  22475      0  12167      0      r
09      0      0      0  22475      T
10      0      0      0  22475      T
11  22475      0      0    755      A
Binding TFs: PROP1 (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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