DNA Binding Motif
Accessions: | PdhR (RegulonDB 7.5) |
Names: | PdhR, PdhR DNA-binding transcriptional dual regulator |
Organisms: | ECK12 |
Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
Length: | 16 |
Consensus: | WATTgGTAwrACCAwT |
Weblogo: | |
PSSM: | P0 A C G T 01 7 0 0 3 W 02 8 0 1 1 A 03 0 2 0 8 T 04 0 1 0 9 T 05 0 2 6 2 g 06 0 0 9 1 G 07 0 1 0 9 T 08 7 2 1 0 A 09 6 0 0 4 w 10 3 2 4 1 r 11 7 0 1 2 A 12 0 9 1 0 C 13 0 7 2 1 C 14 10 0 0 0 A 15 6 0 1 3 w 16 0 1 0 9 T |
Binding TFs: | ECK120005552 (Bacterial regulatory proteins, gntR family, FCD domain) |
Binding Sites: | ECK120017074 ECK120017175 ECK120030690 ECK120033888 ECK120033890 ECK120033892 ECK120033894 ECK125134677 ECK125141272 ECK125141274 |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.