DNA Binding Motif

						

			
Accessions: HOXC11_methyl_5 (HT-SELEX2 May2017)

			
Names: HOXC11
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: srTCGTWAAay
Weblogo: 
PSSM: P0      A      C      G      T
01    565    727    978    467      s
02    926    287   1812     24      r
03    135    255     21   2738      T
04    119   2738      5    151      C
05    519      1   2738     10      G
06      0     84      0   2738      T
07   2738     84     80   1127      W
08   2738      0     32    167      A
09   2738    211     66    158      A
10   2738   1256    956   1490      a
11    577    839    589    733      y
Binding TFs: HOXC11 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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