DNA Binding Motif

						

			
Accessions: LHX9_methyl_1 (HT-SELEX2 May2017)

			
Names: LHX9
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: cTCGTTAd
Weblogo: 
PSSM: P0      A      C      G      T
01   3481   7127   2607   1383      c
02    280    104    266  10608      T
03      0  10608      0      0      C
04   1018      0  10608      0      G
05      0      0      0  10608      T
06      0      0      0  10608      T
07  10608     50     42      0      A
08   3178    799   3543   3087      d
Binding TFs: LHX9 (Homeobox domain, LIM domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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