DNA Binding Motif

						

			
Accessions: M0195 (AthalianaCistrome v4_May2016)

			
Names: T24993;, TGA1.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: wwdrTGACGTCAkCa
Weblogo: 
PSSM: P0      A      C      G      T
01    241     90     74    194      w
02    195     89    133    182      w
03    168     63    196    172      d
04    244    108    221     26      r
05     23     18      0    558      T
06      2     28    517     52      G
07    597      0      0      2      A
08      0    584      0     15      C
09     61      2    536      0      G
10      0      2      0    597      T
11     48    551      0      0      C
12    599      0      0      0      A
13      0     51    208    340      k
14     28    460     45     66      C
15    361     59     81     98      a
Binding TFs: T24993 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.