DNA Binding Motif

						

			
Accessions: GCM1_FOXI1_2_3_4 (HumanTF2 1.0)

			
Names: GCM1_FOXI1
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: RTmAACATrcGGGy
Weblogo: 
PSSM: P0      A      C      G      T
01    125     24    321      0      R
02     59     25     54    445      T
03    269    177      0      4      m
04    445     58     28     55      A
05    445      0    101     26      A
06     23    445      4     52      C
07    445      1      0      2      A
08    120     38     43    445      T
09    199     33    247      6      r
10    109    220     77     40      c
11     71     24    445     42      G
12     12     30    445     10      G
13     30      0    445     29      G
14     67    137     46    196      y
Type: Heterodimer
Binding TFs: FOXI1_TF2 (Fork head domain)
GCM1_TF1 (GCM motif protein)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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