DNA Binding Motif

						

			
Accessions: SP1_DBD (HumanTF 1.0)

			
Names: SP1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 11
Consensus: rCCmCrCCCmc
Weblogo: 
PSSM: P0      A      C      G      T
01   3499    169   3265    624      r
02    891   3265    156    306      C
03    287   3265     81    696      C
04   1622   1643    171      8      m
05     20   3265      6      6      C
06   2011     58   3265   1353      r
07      0   3265      1     10      C
08      6   3265      2      5      C
09      5   3265      0    665      C
10   1470   1795     59    448      m
11   1116   3265    660   1272      c
Binding TFs: SP1_DBD (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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