DNA Binding Motif

						

			
Accessions: UN0098.1 (JASPAR 2024)

			
Names: vad-2
Organisms: Neurospora crassa
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: ycgayCGGwst
Weblogo: 
PSSM: P0      A      C      G      T
01    246    255    244    254      y
02    197    506    100    196      c
03    121    121    633    122      g
04    599     96    105    199      a
05      0    504      0    494      y
06      0    999      0      0      C
07      0     96    903      0      G
08    105      0    894      0      G
09    400    197    100    301      w
10    249    252    347    150      s
11    224    224    224    326      t
Type: Heterodimer
Binding TFs: V5IP15 (Fungal Zn(2)-Cys(6) binuclear cluster domain, Fungal specific transcription factor domain )
V5IP15
			
	
			


			

				

				
				
				
				

			

			

		

	
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