DNA Binding Motif

						

			
Accessions: M0724 (AthalianaCistrome v4_May2016)

			
Names: REM19.ampDAP, T00551;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: wwkamAAAAAAAAAAAAAawa
Weblogo: 
PSSM: P0      A      C      G      T
01    226     30     84    212      w
02    148     65     14    325      w
03    111     50    201    190      k
04    253     60    104    135      a
05    248    214     36     54      m
06    403    136     13      0      A
07    499     43      1      9      A
08    498     10     32     12      A
09    481     61      9      1      A
10    534      2     16      0      A
11    523      2     13     14      A
12    535      3      0     14      A
13    519     14     13      6      A
14    540      0      4      8      A
15    504      6     22     20      A
16    489     44     19      0      A
17    471      1     35     45      A
18    392     47     34     79      A
19    333    102     90     27      a
20    349     23     24    156      w
21    235    105    104    108      a
Binding TFs: T00551 (B3 DNA binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.