DNA Binding Motif

						

			
Accessions: RFX3_methyl_1 (HT-SELEX2 May2017)

			
Names: RFX3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: sGTTryYATRryAACs
Weblogo: 
PSSM: P0      A      C      G      T
01   1102   3931   2724   1880      s
02     90      2   9636      1      G
03      6     46      8   9636      T
04    178   3125      7   9636      T
05   5769    489   9636   2200      r
06      7   9636    455   5421      y
07      0   9636      0   3230      Y
08   9636      1   2824    130      A
09    121   2777     26   9636      T
10   3288      2   9636      0      R
11   5592    473   9636      5      r
12   2124   9636    434   5890      y
13   9636      4   3116    158      A
14   9636     11     25      4      A
15      4   9636      0    117      C
16   1901   2524   4092   1120      s
Binding TFs: RFX3 (RFX DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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