DNA Binding Motif

						

			
Accessions: 4xrs_BI (3D-footprint 20231221)

			
Names: Homeobox protein Meis1
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Heterodimeric complex of transcription factors MEIS1 and DLX3 on specific DNA
Length: 9
Consensus: ganmngatA
Weblogo: 
PSSM: P0      A      C      G      T
01     13     13     56     14      g
02     38     19     20     19      a
03     24     24     24     24      n
04     27     25     22     22      m
05     24     24     24     24      n
06     21     21     31     23      g
07     60     12     12     12      a
08     10     13     10     63      t
09     96      0      0      0      A
Type: Heterodimer
Binding TFs: 4xrs_B (Homeobox domain, Homeobox KN domain)
4xrs_I (Homeobox domain)
Binding Sites: 4xrs_D
4xrs_E
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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