DNA Binding Motif

Accessions: MA1550.2 (JASPAR 2024)
Names: PPARD
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 14
Consensus: rrGGTCAAAGGTCA
Weblogo:
PSSM: P0 A C G T
01 4470 1311 7620 977 r
02 6328 75 6808 13 r
03 101 20 13067 87 G
04 126 10 12074 2112 G
05 21 28 415 12957 T
06 46 11669 931 1894 C
07 13105 0 151 0 A
08 12527 34 866 400 A
09 12693 7 1081 0 A
10 35 12 13135 45 G
11 29 1 12249 1832 G
12 0 39 406 12921 T
13 115 11920 655 1600 C
14 12302 39 1641 51 A
Type: Heterodimer
Binding TFs: Q03181 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q03181
Publications: Schoonjans K, Staels B, Auwerx J. Role of the peroxisome proliferator-activated receptor (PPAR) in mediating the effects of fibrates and fatty acids on gene expression. J Lipid Res 37:907-25 (1996). [Pubmed]

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