DNA Binding Motif

						

			
Accessions: HOXC10_4 (HT-SELEX2 May2017)

			
Names: HOXC10
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gGymATAAAac
Weblogo: 
PSSM: P0      A      C      G      T
01    188    239    403    170      g
02    188    152   1000     92      G
03      0    589      0    412      y
04   1000    879     53     68      m
05   1000     42     65     17      A
06      0      0      0   1000      T
07   1000      2      2    291      A
08   1000      0      0      0      A
09   1000     37      6      0      A
10   1000    349    186    237      a
11    169    438    175    218      c
Binding TFs: HOXC10 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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