DNA Binding Motif

						

			
Accessions: MA0592.3 (JASPAR 2024)

			
Names: ESRRA
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 13
Consensus: kytCAAGGTCAya
Weblogo: 
PSSM: P0      A      C      G      T
01   5231   5066   9007   6691      k
02   3546   8789   6312   7348      y
03   2305   6446   1850  15394      t
04    972  21854   2323    846      C
05  24681    355    556    403      A
06  24744    415    569    267      A
07    480    340  24676    499      G
08    223    146  25332    294      G
09   1003    379    949  23664      T
10    293  23989    786    927      C
11  24648    226    781    340      A
12   5535   9140   4455   6865      y
13   9325   5586   5892   5192      a
Type: Heterodimer
Binding TFs: P11474 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P11474
Binding Sites: MA0592.3.1
MA0592.3.10 / MA0592.3.6
MA0592.3.11 / MA0592.3.7
MA0592.3.12
MA0592.3.13 / MA0592.3.8
MA0592.3.14 / MA0592.3.9
MA0592.3.10 / MA0592.3.15
MA0592.3.11 / MA0592.3.16
MA0592.3.12 / MA0592.3.17
MA0592.3.13 / MA0592.3.18
MA0592.3.14 / MA0592.3.19
MA0592.3.2
MA0592.3.20
MA0592.3.3
MA0592.3.4
MA0592.3.5
MA0592.3.6
MA0592.3.4 / MA0592.3.7
MA0592.3.5 / MA0592.3.8
MA0592.3.9
MA0592.3.15
MA0592.3.16
MA0592.3.17
MA0592.3.18
MA0592.3.19
MA0592.3.20
			
Publications: Dufour C. R., Wilson B. J., Huss J. M., Kelly D. P., Alaynick W. A., Downes M., Evans R. M., Blanchette M., Giguere V. Genome-wide orchestration of cardiac functions by the orphan nuclear receptors ERRalpha and gamma.. Cell Metab. 5:345-356 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.