DNA Binding Motif

Accessions: MA1680.1 (JASPAR 2024)
Names: RVE7
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 14
Consensus: wawAAATATCTwaw
Weblogo:
PSSM: P0 A C G T
01 658 423 318 488 w
02 857 277 397 356 a
03 1074 92 118 603 w
04 1822 11 15 39 A
05 1850 12 11 14 A
06 1856 5 10 16 A
07 26 5 11 1845 T
08 1874 4 2 7 A
09 4 3 2 1878 T
10 10 1863 3 11 C
11 113 109 18 1647 T
12 496 252 189 950 w
13 843 327 317 400 a
14 690 334 272 591 w
Type: Heterodimer
Binding TFs: B3H5A8 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
B3H5A8
Binding Sites: MA1680.1.1
MA1680.1.10
MA1680.1.11
MA1680.1.12
MA1680.1.13
MA1680.1.14
MA1680.1.15
MA1680.1.16
MA1680.1.17
MA1680.1.18
MA1680.1.19
MA1680.1.2
MA1680.1.20
MA1680.1.3
MA1680.1.4
MA1680.1.5
MA1680.1.6
MA1680.1.7
MA1680.1.8
MA1680.1.9

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.