DNA Binding Motif

						

			
Accessions: HNF4A_DBD_2 (HumanTF 1.0)

			
Names: HNF4A
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 16
Consensus: grGGTCAAAGTCCryt
Weblogo: 
PSSM: P0      A      C      G      T
01    508    165   1341    275      g
02    662     28   1187     17      r
03     12      0   1850      1      G
04    135     29   1850    124      G
05     12     25    619   1850      T
06      0   1850      8    196      C
07   1850      5     85      0      A
08   1850      0     46     29      A
09   1850     22     12      8      A
10      0      2   1850      0      G
11      0      0     38   1850      T
12     69   1850    298    305      C
13      4   1850     10    132      C
14   1136      3    713     71      r
15      0    582    429    839      y
16    263    442    327    818      t
Binding TFs: HNF4A_DBD (Zinc finger, C4 type (two domains))
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.