DNA Binding Motif

						

			
Accessions: HOXA6_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXA6
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: bgymATTAas
Weblogo: 
PSSM: P0      A      C      G      T
01    980   1257   1457   1240      b
02   1016   1099   4935    985      g
03      0   2028      0   2907      y
04   4935   2543    314   1040      m
05   4935    466    228      0      A
06      0      0      0   4935      T
07   1246    139    504   4935      T
08   4935     15    412    198      A
09   1857    695   1173   1210      a
10    989   1668   1268   1010      s
Binding TFs: HOXA6 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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