DNA Binding Motif

						

			
Accessions: M0022 (AthalianaCistrome v4_May2016)

			
Names: ERF105.ampDAP, T24736;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 24
Consensus: ycgcckccrccrccdcCGCCGCCr
Weblogo: 
PSSM: P0      A      C      G      T
01    102    247     92    150      y
02    120    263     71    137      c
03    147    113    193    138      g
04     94    258    100    139      c
05    112    262     92    125      c
06    138     85    202    166      k
07     77    289     81    144      c
08     91    300     82    118      c
09    166     97    211    117      r
10     83    290     88    130      c
11     85    318     63    125      c
12    162     81    239    109      r
13     82    292     84    133      c
14    117    326     40    108      c
15    149     55    227    160      d
16     33    326    123    109      c
17    104    476      8      3      C
18     15      0    550     26      G
19      0    585      6      0      C
20      7    584      0      0      C
21     17      0    570      4      G
22      4    524      6     57      C
23      0    589      2      0      C
24    241      0    273     77      r
Binding TFs: T24736 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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