DNA Binding Motif

						

			
Accessions: UN0398.1 (JASPAR 2024)

			
Names: ENY
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 17
Consensus: wwTTTTGTCkTtTtbtk
Weblogo: 
PSSM: P0      A      C      G      T
01    294    113    129    464      w
02    259    139    168    434      w
03    114  50.42  50.42    785      T
04  8.403 33.613 13.445    945      T
05      0  5.042  6.723    988      T
06      0  3.361      0    997      T
07      0      0   1000      0      G
08      0  1.681  5.042    993      T
09      0   1000      0      0      C
10 26.891 95.798    627 250.42      k
11  3.361 40.336 45.378    911      T
12    145    133 62.185    661      t
13 174.79  1.681  3.361    820      T
14    239 92.437 31.933    637      t
15    108 324.37    304    264      b
16 94.118    239    129    538      t
17    249    109    353    289      k
Type: Heterodimer
Binding TFs: Q9LVQ7 (Zinc-finger double-stranded RNA-binding)
Q9LVQ7
			
	
			


			

				

				
				
				
				

			

			

		

	
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