DNA Binding Motif

						

			
Accessions: M0641 (AthalianaCistrome v4_May2016)

			
Names: ANAC045.DAP, T13400;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CkTGwrgwwsAAGyAA
Weblogo: 
PSSM: P0      A      C      G      T
01      2    593      0      0      C
02      0     17    258    320      k
03      0      1      0    594      T
04     93     55    437     10      G
05    152    142     72    229      w
06    192     83    183    137      r
07    147    111    196    141      g
08    190    143    111    151      w
09    273     53    116    153      w
10     33    362    178     22      s
11    595      0      0      0      A
12    494     94      7      0      A
13      0      0    594      1      G
14    119    243     83    150      y
15    429     72      2     92      A
16    585      0      0     10      A
Binding TFs: T13400 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.