DNA Binding Motif

						

			
Accessions: 1ig7_A (3D-footprint 20231221)

			
Names: Homeotic protein Msx-1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Msx-1 Homeodomain/DNA Complex Structure
Length: 7
Consensus: cTAATnG
Weblogo: 
PSSM: P0      A      C      G      T
01     10     64     10     12      c
02      0      0      0     96      T
03     76     10      0     10      A
04     96      0      0      0      A
05     10     10     10     66      T
06     24     24     24     24      n
07      0      0     96      0      G
Binding TFs: 1ig7_A (Homeobox domain)
Binding Sites: 1ig7_B
1ig7_C
			
Publications: Hovde S, Abate-Shen C, Geiger J.H. Crystal structure of the Msx-1 homeodomain/DNA complex. Biochemistry 40:12013-21 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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