DNA Binding Motif

						

			
Accessions: 6f41_U (3D-footprint 20231221)

			
Names: TATA-box-binding protein
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: RNA Polymerase III initially transcribing complex
Length: 7
Consensus: AntTnTa
Weblogo: 
PSSM: P0      A      C      G      T
01     96      0      0      0      A
02     24     24     24     24      n
03     13     16     13     54      t
04      0      0      0     96      T
05     24     24     24     24      n
06      0      0      0     96      T
07     54     13     13     16      a
Binding TFs: 6f41_U (Transcription factor TFIID (or TATA-binding protein, TBP))
Binding Sites: 6f41_X
6f41_Y
			
Publications: Vorländer MK, Khatter H, Wetzel R, Hagen WJH, Müller CW. Molecular mechanism of promoter opening by RNA polymerase III. Nature 553:295-300 (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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