DNA Binding Motif

						

			
Accessions: 1cf7_A (3D-footprint 20231221)

			
Names: PROTEIN (TRANSCRIPTION FACTOR E2F-4)
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP
Length: 8
Consensus: tTcGCGCG
Weblogo: 
PSSM: P0      A      C      G      T
01     12     12     12     60      t
02      0      6      0     90      T
03     12     60     12     12      c
04     12     12     66      6      G
05      0     90      6      0      C
06      0      0     96      0      G
07      0     96      0      0      C
08      0      0     96      0      G
Binding TFs: 1cf7_A (E2F/DP family winged-helix DNA-binding domain)
Binding Sites: 1cf7_C
1cf7_D
			
Publications: Zheng N., Fraenkel E., Pabo C. O., Pavletich N. P. Structural basis of DNA recognition by the heterodimeric cell cycle transcription factor E2F-DP. Genes Dev. 13:666-674 (1999). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.