DNA Binding Motif

						

			
Accessions: TEAD4_HOXA13_2 (HumanTF2 1.0)

			
Names: TEAD4_HOXA13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 14
Consensus: GGwATGCycrTWAA
Weblogo: 
PSSM: P0      A      C      G      T
01    157     31    517     51      G
02     47     55    517     79      G
03    342     35     11    175      w
04    517      6     25     27      A
05      6     50     16    517      T
06      4     26    517    174      G
07     21    418     20     59      C
08    101    139     61    217      y
09    102    256     42    117      c
10    215      8    302     61      r
11      6     25     19    517      T
12    517      9     25    197      W
13    517     19     17     35      A
14    517     65     35     55      A
Type: Heterodimer
Binding TFs: HOXA13_TF2 (Homeobox domain, Hox protein A13 N terminal)
HOXA13_Full (Homeobox domain, Hox protein A13 N terminal)
TEAD4_TF1 (TEA/ATTS domain family)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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