DNA Binding Motif
| Accessions: | MA1001.3 (JASPAR 2024) |
| Names: | ERF11 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | cCGCCGCCrCcr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 138 830 181 224 c 02 193 1008 63 109 C 03 59 6 1270 38 G 04 4 1347 13 9 C 05 16 1346 5 6 C 06 76 2 1271 24 G 07 9 1281 9 74 C 08 40 1304 11 18 C 09 852 5 435 81 r 10 85 1086 45 157 C 11 290 653 144 286 c 12 435 126 522 290 r |
| Type: | Heterodimer |
| Binding TFs: | Q9C5I3 (AP2 domain) Q9C5I3 |
| Binding Sites: | MA1001.3.16 / MA1001.3.17 MA1001.3.2 MA1001.3.4 MA1001.3.5 MA1001.3.1 MA1001.3.10 MA1001.3.11 MA1001.3.12 MA1001.3.13 MA1001.3.14 MA1001.3.15 MA1001.3.18 MA1001.3.19 MA1001.3.20 MA1001.3.3 MA1001.3.6 MA1001.3.7 MA1001.3.8 MA1001.3.9 |
| Publications: | Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.