DNA Binding Motif

						

			
Accessions: MA1872.2 (JASPAR 2024)

			
Names: FoxO
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 9
Consensus: aacATGTTT
Weblogo: 
PSSM: P0      A      C      G      T
01    560    105    103    231      a
02    584     89    121    205      a
03    213    408    130    249      c
04    720     32     72    175      A
05     15     12      5    969      T
06    179      5    787     29      G
07      8     15      7    970      T
08     23      8     31    938      T
09     70      9    114    807      T
Type: Heterodimer
Binding TFs: Q4H3H7 (Fork head domain)
Q4H3H7
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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