DNA Binding Motif
| Accessions: | GCM1_FIGLA_2_3 (HumanTF2 1.0) |
| Names: | GCM1_FIGLA |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 22 |
| Consensus: | CAssTGkkgsgkkggrTGcGGG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 22 1446 69 59 C 02 1446 59 124 90 A 03 16 478 968 37 s 04 10 563 883 11 s 05 45 65 70 1446 T 06 20 6 1446 51 G 07 153 277 534 482 k 08 313 255 462 417 k 09 312 281 561 292 g 10 219 381 499 347 s 11 287 264 590 305 g 12 352 275 455 364 k 13 315 302 452 377 k 14 296 294 506 351 g 15 250 355 526 316 g 16 652 180 560 54 r 17 157 117 175 1446 T 18 481 89 1446 10 G 19 336 1446 462 400 c 20 178 75 1446 405 G 21 11 52 1446 84 G 22 7 2 1446 31 G |
| Type: | Heterodimer |
| Binding TFs: | FIGLA_TF2 (Helix-loop-helix DNA-binding domain) GCM1_TF1 (GCM motif protein) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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