DNA Binding Motif
| Accessions: | MA1996.1 (JASPAR 2024) |
| Names: | Nr1H2 |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 11 |
| Consensus: | ywrAGGTCAyr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1886 2733 2014 2338 y 02 2601 2091 1858 2421 w 03 4028 1340 2796 807 r 04 8549 191 132 99 A 05 88 171 8521 191 G 06 91 36 8740 104 G 07 61 35 41 8834 T 08 147 8483 72 269 C 09 8642 51 241 37 A 10 1648 2757 2224 2342 y 11 2480 2069 2255 2167 r |
| Binding Sites: | MA1996.1.1 MA1996.1.10 MA1996.1.11 / MA1996.1.8 MA1996.1.10 / MA1996.1.12 MA1996.1.11 / MA1996.1.13 MA1996.1.12 / MA1996.1.14 MA1996.1.15 MA1996.1.14 / MA1996.1.16 MA1996.1.16 / MA1996.1.17 MA1996.1.17 / MA1996.1.18 MA1996.1.19 MA1996.1.2 MA1996.1.20 MA1996.1.3 MA1996.1.4 MA1996.1.5 MA1996.1.6 MA1996.1.7 MA1996.1.8 MA1996.1.7 / MA1996.1.9 MA1996.1.13 MA1996.1.15 MA1996.1.18 MA1996.1.9 |
| Publications: | Penvose A, Keenan JL, Bray D, Ramlall V, Siggers T. Comprehensive study of nuclear receptor DNA binding provides a revised framework for understanding receptor specificity. Nat Commun 10:2514 (2019). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.