DNA Binding Motif

						

			
Accessions: MA1913.1 (JASPAR 2024)

			
Names: small-Maf
Organisms: Ciona intestinalis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 20
Consensus: kdrwwwwTGCTGAykyarsm
Weblogo: 
PSSM: P0      A      C      G      T
01    236    234    260    270      k
02    265    214    262    259      d
03    318    173    265    244      r
04    359    130    233    278      w
05    366    109    171    355      w
06    303    135    153    409      w
07    272    167    224    336      w
08     59    102     20    819      T
09      9      9    975      7      G
10     62    910      9     19      C
11     28     20     11    941      T
12     32     17    848    102      G
13    903     29     25     43      A
14    106    388    246    259      y
15    188    202    259    351      k
16    213    268    173    345      y
17    335    195    241    229      a
18    251    109    445    194      r
19    151    364    326    159      s
20    306    307    213    174      m
Type: Heterodimer
Binding TFs: Q4H2T2 (bZIP Maf transcription factor)
Q4H2T2
			
Publications: Yang Y, Cvekl A. Large Maf Transcription Factors: Cousins of AP-1 Proteins and Important Regulators of Cellular Differentiation. Einstein J Biol Med : (2007;23(1):2-11.). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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