DNA Binding Motif

						

			
Accessions: NKX2-8_DBD (HumanTF 1.0)

			
Names: NKX2-8
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 9
Consensus: sCACTYvav
Weblogo: 
PSSM: P0      A      C      G      T
01   1855   3052   2905    222      s
02     77   8034     65   1987      C
03   8034    528     20    700      A
04     84   8034     32     77      C
05      0     17      0   8034      T
06     87   3634     16   8034      Y
07   2134   2227   3308    366      v
08   8034   1072   1152   2254      a
09   2498   2022   2578    935      v
Binding TFs: NKX2-8_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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