DNA Binding Motif

						

			
Accessions: MA1756.1 (JASPAR 2024)

			
Names: GRF9
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: tTGTCAGAarwywca
Weblogo: 
PSSM: P0      A      C      G      T
01    163    130    185    522      t
02 32.609    109 43.478    815      T
03      0      0   1000      0      G
04      0      0      0   1000      T
05      0    902      0 97.826      C
06    967 32.609      0      0      A
07      0      0   1000      0      G
08 760.87 32.609 97.826    109      A
09    478    163    207    152      a
10    337    130    304    228      r
11    457    163    120 260.87      w
12    130    250 239.13    380      y
13    370    163    130    337      w
14 239.13    413 239.13    109      c
15    478    217    120    185      a
Type: Heterodimer
Binding TFs: Q8S9M3 (WRC, QLQ)
Q8S9M3
			
Publications: Kim JS, Mizoi J, Kidokoro S, Maruyama K, Nakajima J, Nakashima K, Mitsuda N, Takiguchi Y, Ohme-Takagi M, Kondou Y, Yoshizumi T, Matsui M, Shinozaki K, Yamaguchi-Shinozaki K. Arabidopsis growth-regulating factor7 functions as a transcriptional repressor of abscisic acid- and osmotic stress-responsive genes, including DREB2A. Plant Cell 24:3393-405 (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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