DNA Binding Motif

						

			
Accessions: MA1771.1 (JASPAR 2024)

			
Names: MYB41
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: dtwgttyACCTAmyt
Weblogo: 
PSSM: P0      A      C      G      T
01    250    109    250    391      d
02    201    185 86.957    527      t
03    310 92.391    212 385.87      w
04    103    141    522    234      g
05 65.217 239.13    201    495      t
06 76.087    179 70.652    674      t
07    103    457    109    332      y
08   1000      0      0      0      A
09 54.348    946      0      0      C
10      0   1000      0      0      C
11 92.391 16.304      0    891      T
12   1000      0      0      0      A
13    620    370      0  10.87      m
14 97.826    538 21.739    342      y
15    217 135.87  10.87 635.87      t
Type: Heterodimer
Binding TFs: Q9M0J5 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9M0J5
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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