DNA Binding Motif

						

			
Accessions: MA1140.1 (JASPAR 2024)

			
Names: JUNB, JUNB(var.2)
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SMiLE-seq
Length: 10
Consensus: rTkACGTmAy
Weblogo: 
PSSM: P0      A      C      G      T
01    528    102    274     96      r
02     43     25     36    896      T
03     31     69    608    291      k
04    850     20     66     64      A
05     30    825     61     84      C
06     83     58    828     32      G
07     62     63     23    852      T
08    290    605     72     33      m
09    894     33     29     45      A
10     95    271    105    530      y
Type: Heterodimer
Binding TFs: P17275 (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
P17275
			
Publications: Li M, Ge Q, Wang W, Wang J, Lu Z. c-Jun binding site identification in K562 cells. Journal of genetics and genomics = Yi chuan xue bao 38:235-42 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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