DNA Binding Motif

						

			
Accessions: HOXD12_2 (HT-SELEX2 May2017)

			
Names: HOXD12
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: srTCGTwAah
Weblogo: 
PSSM: P0      A      C      G      T
01    607   1033   1311    659      s
02   1197    605   2413     38      r
03     31     60      9   3610      T
04      0   3610      0    109      C
05    454      0   3610      0      G
06      0      0      0   3610      T
07   3610      0      0   1904      w
08   3610     82      0    166      A
09   3610    878    197    851      a
10    939   1133    575    964      h
Binding TFs: HOXD12 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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