DNA Binding Motif

						

			
Accessions: 6ml7_A (3D-footprint 20231221)

			
Names: Zinc finger and BTB domain-containing protein 24
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: ZBTB24 Zinc Fingers 4-8 with 19+1mer DNA Oligonucleotide (Sequence 4 with a CpG 5mC Modification)
Length: 13
Consensus: AGGTCCTGGAmGa
Weblogo: 
PSSM: P0      A      C      G      T
01     96      0      0      0      A
02      0      0     96      0      G
03      0      0     96      0      G
04      0      0      0     96      T
05      0     96      0      0      C
06      0     96      0      0      C
07      0      0      0     96      T
08      0      0     96      0      G
09     17      2     69      8      G
10     96      0      0      0      A
11     52     28      8      8      m
12      0      0     96      0      G
13     61      8     17     10      a
Binding TFs: 6ml7_A (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Binding Sites: 6ml7_F
6ml7_E
			
Publications: Ren R, Hardikar S, Horton JR, Lu Y, Zeng Y, Singh AK, Lin K, Coletta LD, Shen J, Lin Kong CS, Hashimoto H, Zhang X, Chen T, Cheng X. Structural basis of specific DNA binding by the transcription factor ZBTB24. Nucleic Acids Res 47:8388-8398 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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