DNA Binding Motif
| Accessions: | MA1724.2 (JASPAR 2024) |
| Names: | Rfx6 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 9 |
| Consensus: | CCTAGCAAC |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 187 7859 232 272 C 02 1093 6405 242 810 C 03 344 1066 146 6994 T 04 7215 64 1205 66 A 05 179 102 8215 54 G 06 378 7474 359 339 C 07 8085 117 132 216 A 08 7740 258 339 213 A 09 552 6811 552 635 C |
| Type: | Heterodimer |
| Binding TFs: | Q8C7R7 (RFX DNA-binding domain) Q8C7R7 |
| Binding Sites: | MA1724.2.6 / MA1724.2.7 / MA1724.2.8 MA1724.2.1 / MA1724.2.11 / MA1724.2.14 / MA1724.2.18 / MA1724.2.19 / MA1724.2.2 / MA1724.2.20 / MA1724.2.3 / MA1724.2.4 / MA1724.2.9 MA1724.2.12 / MA1724.2.5 MA1724.2.10 MA1724.2.13 MA1724.2.15 / MA1724.2.16 / MA1724.2.17 |
| Publications: | Trott J, Alpagu Y, Tan EK, Shboul M, Dawood Y, Elsy M, Wollmann H, Tano V, Bonnard C, Eng S, Narayanan G, Junnarkar S, Wearne S, Strutt J, Kumar A, Tomaz LB, Goy PA, Mzoughi S, Jennings R, Hagoort J, Eskin A, Lee H, Nelson SF, Al-Kazaleh F, El-Khateeb M, Fathallah R, Shah H, Goeke J, Langley SR, Guccione E, Hanley N, De Bakker BS, Reversade B, Dunn NR. Mitchell-Riley syndrome iPSCs exhibit reduced pancreatic endoderm differentiation due to a mutation in RFX6. Development : (2020). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.