DNA Binding Motif

						

			
Accessions: MA0491.3 (JASPAR 2024)

			
Names: JUND
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 9
Consensus: aTGACTCAT
Weblogo: 
PSSM: P0      A      C      G      T
01  70166  10173  20586   5020      a
02    644    757    443 104101      T
03   1365    873  99787   3920      G
04 103797    650    573    925      A
05   4634  76028  20633   4650      C
06   2053    496   1147 102249      T
07   4915  98628    953   1449      C
08 103420    751    965    809      A
09   2796  12025   7908  83216      T
Type: Heterodimer
Binding TFs: P17535 (bZIP transcription factor, Jun-like transcription factor, Basic region leucine zipper)
P17535
Binding Sites: MA0491.3.2
MA0491.3.13 / MA0491.3.5
MA0491.3.14
MA0491.3.1 / MA0491.3.15
MA0491.3.16
MA0491.3.17 / MA0491.3.4
MA0491.3.18
MA0491.3.19
MA0491.3.3
MA0491.3.11 / MA0491.3.12 / MA0491.3.6 / MA0491.3.8
MA0491.3.10
MA0491.3.7
MA0491.3.20
MA0491.3.9
			
Publications: Colin L, Vandenhoudt N, de Walque S, Van Driessche B, Bergamaschi A, Martinelli V, Cherrier T, Vanhulle C, Guiguen A, David A, Burny A, Herbein G, Pancino G, Rohr O, Van Lint C. The AP-1 binding sites located in the pol gene intragenic regulatory region of HIV-1 are important for viral replication. PloS one 6:e19084 (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.