DNA Binding Motif

						

			
Accessions: 4aa6_E (3D-footprint 20231221)

			
Names: ESTROGEN RECEPTOR
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: The oestrogen receptor recognizes an imperfectly palindromic response element through an alternative side-chain conformation
Length: 6
Consensus: aaGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01     60     12     12     12      a
02     60     12     12     12      a
03      0      0     96      0      G
04      0      0      0     96      T
05      0     84      0     12      C
06     96      0      0      0      A
Binding TFs: 4aa6_E (Zinc finger, C4 type (two domains))
Binding Sites: 4aa6_G
4aa6_H
			
Publications: Schwabe J.W, Chapman L, Rhodes D. The oestrogen receptor recognizes an imperfectly palindromic response element through an alternative side-chain conformation. Structure (London, England : 1993) 3:201-13 (1995). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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