DNA Binding Motif

						

			
Accessions: MA1714.1 (JASPAR 2024)

			
Names: ZNF675
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 21
Consensus: rgGmyyarGAGGmcAaAATGw
Weblogo: 
PSSM: P0      A      C      G      T
01    400    101    377    122      r
02    142     39    651    167      g
03     90     35    797     78      G
04    391    261    247    101      m
05    186    361    133    320      y
06 139.84 338.47     94    428      y
07 441.21    245    174 139.84      a
08    313     19    647     21      r
09     42 9.7032    934     14      G
10    695     21    233     51      A
11     35   7.42    843    115      G
12     30   5.14    857    108      G
13    590    304     78 27.968      m
14 110.16    656     35    199      c
15    781     83     33    103      A
16 676.37    108    172     44      a
17    994   2.85   2.85   0.57      A
18    991   5.14   2.85   0.57      A
19     30    224     46    699      T
20     37   5.14    937     21      G
21    265     87    217    430      w
Type: Heterodimer
Binding TFs: Q8TD23 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8TD23
			
Publications: Dinh DT, Breen J, Akison LK, DeMayo FJ, Brown HM, Robker RL, Russell DL. Tissue-specific progesterone receptor-chromatin binding and the regulation of progesterone-dependent gene expression. Sci Rep 9:11966 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.