DNA Binding Motif

						

			
Accessions: 3a01_F (3D-footprint 20231221)

			
Names: Homeobox protein aristaless
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of Aristaless and Clawless homeodomains bound to DNA
Length: 8
Consensus: TTAAnnAA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02      9      9     11     67      T
03     96      0      0      0      A
04     96      0      0      0      A
05     24     24     24     24      n
06     24     24     24     24      n
07     69      9      9      9      A
08     69      9      9      9      A
Binding TFs: 3a01_F (Homeobox domain)
Binding Sites: 3a01_G
3a01_H
			
Publications: Miyazono K, Zhi Y, Takamura Y, Nagata K, Saigo K, Kojima T, Tanokura M. Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless. The EMBO journal 29:1613-23 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.