DNA Binding Motif

						

			
Accessions: M0627 (AthalianaCistrome v4_May2016)

			
Names: SMB.ampDAP, T00244;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CKTrwrdwwsAMGcaA
Weblogo: 
PSSM: P0      A      C      G      T
01     53    517      0     21      C
02      0      0    412    179      K
03      0      0      0    591      T
04    224     13    354      0      r
05    200    118     88    185      w
06    206     89    202     94      r
07    169    106    160    156      d
08    202    103     79    207      w
09    176     75    102    238      w
10     59    262    174     96      s
11    577     10      1      3      A
12    417    167      7      0      M
13      3      0    572     16      G
14     96    245    103    147      c
15    360     61     41    129      a
16    524      2      0     65      A
Binding TFs: T00244 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.