DNA Binding Motif

						

			
Accessions: SREBF2_methyl_1 (HT-SELEX2 May2017)

			
Names: SREBF2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: ATCAgGTGAT
Weblogo: 
PSSM: P0      A      C      G      T
01   5577    254   1918     10      A
02     94     13     15   5577      T
03     82   5577    728     13      C
04   5577     10    158    312      A
05     19   1626   5577    990      g
06     77    377   5577      0      G
07    175    220     30   5577      T
08      7    176   5577     15      G
09   5577     12    146    135      A
10     43   1294    377   4284      T
Binding TFs: SREBF2 (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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