DNA Binding Motif

						

			
Accessions: M0692 (AthalianaCistrome v4_May2016)

			
Names: T24538;, VND3.ampDAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: CkTraarwwsAAGCAAy
Weblogo: 
PSSM: P0      A      C      G      T
01      7    580      0      0      C
02      0      0    239    348      k
03      0      0      0    587      T
04    221     42    304     20      r
05    236    124     95    132      a
06    272     68    146    101      a
07    204    109    150    124      r
08    197    114     80    196      w
09    225     76    104    182      w
10     56    295    155     81      s
11    584      3      0      0      A
12    475    112      0      0      A
13      0      0    583      4      G
14     35    435     32     85      C
15    500     18     14     55      A
16    569      0      0     18      A
17     97    222     97    171      y
Binding TFs: T24538 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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