DNA Binding Motif

						

			
Accessions: M0102 (AthalianaCistrome v4_May2016)

			
Names: DREB2.ampDAP, T24768;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: hhthmACCGMCwTwa
Weblogo: 
PSSM: P0      A      C      G      T
01    146    160     81    180      h
02    162    185     42    178      h
03    139     77    111    240      t
04    151    195     67    154      h
05    228    310     21      8      m
06    513      0     54      0      A
07      0    566      0      1      C
08      0    567      0      0      C
09      1      0    566      0      G
10    389    177      0      1      M
11      0    567      0      0      C
12    383      3     11    170      w
13     31     22      8    506      T
14    333     30     17    187      w
15    270     59    126    112      a
Binding TFs: T24768 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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