DNA Binding Motif

						

			
Accessions: M0708 (AthalianaCistrome v4_May2016)

			
Names: ANAC013.ampDAP, T05444;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: dTwaCTTGsrgarCAAG
Weblogo: 
PSSM: P0      A      C      G      T
01    149     29    118    148      d
02     80     11      3    350      T
03    112      2     84    246      w
04    183     89    102     70      a
05      0    444      0      0      C
06      0      0     89    355      T
07      0      0      0    444      T
08      2      0    442      0      G
09     77    117    155     95      s
10    137     97    128     82      r
11     91     42    227     84      g
12    249     71     81     43      a
13    209     37    146     52      r
14     18    375     38     13      C
15    444      0      0      0      A
16    362     80      2      0      A
17      0      0    441      3      G
Binding TFs: T05444 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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