DNA Binding Motif

						

			
Accessions: HOXC8_methyl_1 (HT-SELEX2 May2017)

			
Names: HOXC8
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: rtCrTTAw
Weblogo: 
PSSM: P0      A      C      G      T
01   2830   1207   4607     99      r
02    951   1990    594   7437      t
03    890   7437    373    689      C
04   4800     81   7437    223      r
05      3    207      0   7437      T
06   2512    262     68   7437      T
07   7437    208    482   1064      A
08   3019   1082   1221   2115      w
Binding TFs: HOXC8 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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