DNA Binding Motif

						

			
Accessions: CLOCK_2 (HT-SELEX2 May2017)

			
Names: CLOCK
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rmCACGTGyc
Weblogo: 
PSSM: P0      A      C      G      T
01   3925   1873   6288   2835      r
02   7278   7642   2194    777      m
03   1148  14920      0      0      C
04  14920      0    802     62      A
05      0  13984      0    935      C
06    589      0  14920      0      G
07      0   1259      0  14920      T
08     20      0  14920    382      G
09    701   8428   1537   6492      y
10   3665   4844   3063   3348      c
Binding TFs: CLOCK (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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