DNA Binding Motif

						

			
Accessions: TEAD4_HOXB13_2_3_4_5_6 (HumanTF2 1.0)

			
Names: TEAD4_HOXB13
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 12
Consensus: stcrTAAAATGy
Weblogo: 
PSSM: P0      A      C      G      T
01     72    151     79      2      s
02     28    127     54    304      t
03     52    304     13    108      c
04    120      0    304     32      r
05     10      0      3    304      T
06    304      0     64     60      A
07    304      0     22     28      A
08    304     13      1     42      A
09    304     42      5     26      A
10      5     38     13    304      T
11     13     31    304     28      G
12      4    304     23    164      y
Type: Heterodimer
Binding TFs: HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
TEAD4_TF1 (TEA/ATTS domain family)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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