DNA Binding Motif

						

			
Accessions: 1mjm_B (3D-footprint 20231221)

			
Names: METHIONINE REPRESSOR
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE
Length: 7
Consensus: GAcnnCT
Weblogo: 
PSSM: P0      A      C      G      T
01      0      8     71     17      G
02     96      0      0      0      A
03     19     52      8     17      c
04     24     24     24     24      n
05     24     24     24     24      n
06      0     96      0      0      C
07     11      8      8     69      T
Binding TFs: 1mjm_B (Met Apo-repressor, MetJ)
Binding Sites: 1mjm_C / 1mjm_D
			
Publications: Garvie C.W, Phillips S.E. Direct and indirect readout in mutant Met repressor-operator complexes. Structure (London, England : 1993) 8:905-14 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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