DNA Binding Motif
| Accessions: | MA1928.1 (JASPAR 2024) |
| Names: | BNC2 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 12 |
| Consensus: | wwrTGAGTCAyw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1444 1414 1339 1475 w 02 1812 727 1267 1866 w 03 1471 880 2864 457 r 04 147 66 96 5363 T 05 134 72 5184 282 G 06 5303 117 61 191 A 07 227 838 4332 275 G 08 86 106 80 5400 T 09 216 5238 112 106 C 10 5483 54 56 79 A 11 592 1637 1192 2251 y 12 1692 1348 1028 1604 w |
| Type: | Heterodimer |
| Binding TFs: | Q6ZN30 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, C2H2-type zinc finger) Q6ZN30 |
| Binding Sites: | MA1928.1.1 / MA1928.1.4 MA1928.1.10 / MA1928.1.16 MA1928.1.11 / MA1928.1.18 MA1928.1.12 / MA1928.1.20 MA1928.1.13 MA1928.1.14 MA1928.1.15 MA1928.1.16 MA1928.1.17 MA1928.1.18 MA1928.1.19 MA1928.1.2 / MA1928.1.5 MA1928.1.20 MA1928.1.3 / MA1928.1.7 MA1928.1.4 MA1928.1.5 / MA1928.1.8 MA1928.1.10 / MA1928.1.6 MA1928.1.12 / MA1928.1.7 MA1928.1.13 / MA1928.1.8 MA1928.1.14 / MA1928.1.9 MA1928.1.1 MA1928.1.11 MA1928.1.15 MA1928.1.17 MA1928.1.19 MA1928.1.2 MA1928.1.3 MA1928.1.6 MA1928.1.9 |
| Publications: | Buckley MA, Woods NT, Tyrer JP, Mendoza-Fandiño G, Lawrenson K, Hazelett DJ, Najafabadi HS, Gjyshi A, Carvalho RS, Lyra PC Jr, Coetzee SG, Shen HC, Yang AW, Earp MA, Yoder SJ, Risch H, Chenevix-Trench G, Ramus SJ, Phelan CM, Coetzee GA, Noushmehr H, Hughes TR, Sellers TA, Goode EL, Pharoah PD, Gayther SA, Monteiro ANA; Ovarian Cancer Association Consortium. Functional Analysis and Fine Mapping of the 9p22. 2 Ovarian Cancer Susceptibility Locus 79:467-481 (Cancer). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.